Release History
TODO
support cache for downloaded h5ad data
rename local_permI to local_permI_L (also global)
tentatively: make new adata with LR genes only (if raw exist, other make raw)
Version 0.1.0 (15/04/2023)
Minor fix with supporting sparse matrix for adata.X
Disabled the output of local permutaiton data in notebook
More efficient KNN graph construction, with obsp elements into sparse matrix
Added LR data into package
Minor fix concat_obj() function
Minor updates on notebooks: SpatialDE limited one CPU; diff-test only z-score
Suggest adding adata.obsm[‘celltypes’] dataframe to replace adata.obs
Version 0.0.8 (14/03/2023)
SpatialDM wrapped into AnnData object, fixed typos
Version 0.0.1 (11/08/2022)
Alpha version of SpatialDM released